Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Gm15487-201ENSMUST00000122373 465 ntBASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh8Q7TSK3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Gm16215-201ENSMUST00000161990 637 ntBASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Gm27838-201ENSMUST00000184829 128 ntBASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Olfr286-202ENSMUST00000205305 969 ntBASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Gm7730-201ENSMUST00000212486 454 ntBASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Gm46209-201ENSMUST00000217912 553 ntBASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh8Q7TSK3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Gm14719-201ENSMUST00000121891 340 ntBASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Gm27631-201ENSMUST00000184163 466 ntBASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Gm5186-201ENSMUST00000218781 920 ntBASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh8Q7TSK3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms