Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.05□□□□□ -0.48
Smim12Q78RX3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Smim12Q78RX3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Smim12Q78RX3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Smim12Q78RX3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim12Q78RX3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Gm13597-201ENSMUST00000121239 375 ntBASIC12.04□□□□□ -0.48
Smim12Q78RX3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Gm21362-201ENSMUST00000194272 928 ntBASIC12.04□□□□□ -0.48
Smim12Q78RX3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.04□□□□□ -0.48
Smim12Q78RX3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smim12Q78RX3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.03□□□□□ -0.48
Smim12Q78RX3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Smim12Q78RX3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Gm18195-201ENSMUST00000207604 706 ntBASIC12.03□□□□□ -0.48
Smim12Q78RX3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Smim12Q78RX3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.03□□□□□ -0.48
Smim12Q78RX3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smim12Q78RX3 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.03□□□□□ -0.48
Smim12Q78RX3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smim12Q78RX3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smim12Q78RX3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smim12Q78RX3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Smim12Q78RX3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smim12Q78RX3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smim12Q78RX3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smim12Q78RX3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smim12Q78RX3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim12Q78RX3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smim12Q78RX3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smim12Q78RX3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smim12Q78RX3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smim12Q78RX3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.02□□□□□ -0.49
Smim12Q78RX3 Gm5177-201ENSMUST00000183092 997 ntBASIC12.02□□□□□ -0.49
Smim12Q78RX3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.02□□□□□ -0.49
Smim12Q78RX3 Gm27628-201ENSMUST00000184911 107 ntBASIC12.02□□□□□ -0.49
Smim12Q78RX3 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms