Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup98Q6PFD9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Gm12403-201ENSMUST00000121384 959 ntBASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Gm6007-201ENSMUST00000208170 823 ntBASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup98Q6PFD9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nup98Q6PFD9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nup98Q6PFD9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
Nup98Q6PFD9 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.58■□□□□ 0.25
Nup98Q6PFD9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nup98Q6PFD9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nup98Q6PFD9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nup98Q6PFD9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nup98Q6PFD9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Gm43630-201ENSMUST00000201550 776 ntBASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Gm18473-201ENSMUST00000220543 868 ntBASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nup98Q6PFD9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nup98Q6PFD9 Gm8062-201ENSMUST00000139696 444 ntBASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Gm42442-201ENSMUST00000197951 1133 ntBASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms