Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Gm4459-201ENSMUST00000118750 468 ntBASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rnf220Q6PDX6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf220Q6PDX6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Gm27867-201ENSMUST00000184778 125 ntBASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms