Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chd4Q6PDQ2 Gm8337-201ENSMUST00000187358 1938 ntBASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Gm12742-201ENSMUST00000117326 410 ntBASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Gm18054-201ENSMUST00000207539 555 ntBASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Gm7561-201ENSMUST00000211203 886 ntBASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Gm17870-201ENSMUST00000219489 1174 ntBASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd4Q6PDQ2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Gm12203-201ENSMUST00000118235 598 ntBASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Gm12209-201ENSMUST00000120089 596 ntBASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chd4Q6PDQ2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chd4Q6PDQ2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chd4Q6PDQ2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chd4Q6PDQ2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chd4Q6PDQ2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chd4Q6PDQ2 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Chd4Q6PDQ2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chd4Q6PDQ2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC18.33■□□□□ 0.53
Chd4Q6PDQ2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC18.33■□□□□ 0.53
Chd4Q6PDQ2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC18.33■□□□□ 0.53
Chd4Q6PDQ2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC18.33■□□□□ 0.53
Chd4Q6PDQ2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chd4Q6PDQ2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chd4Q6PDQ2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chd4Q6PDQ2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chd4Q6PDQ2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chd4Q6PDQ2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd4Q6PDQ2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd4Q6PDQ2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd4Q6PDQ2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.33■□□□□ 0.52
Chd4Q6PDQ2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC18.33■□□□□ 0.52
Chd4Q6PDQ2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC18.33■□□□□ 0.52
Chd4Q6PDQ2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC18.33■□□□□ 0.52
Chd4Q6PDQ2 Gm45331-201ENSMUST00000209868 554 ntBASIC18.33■□□□□ 0.52
Chd4Q6PDQ2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Chd4Q6PDQ2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC18.33■□□□□ 0.52
Chd4Q6PDQ2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd4Q6PDQ2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd4Q6PDQ2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd4Q6PDQ2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd4Q6PDQ2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.32■□□□□ 0.52
Chd4Q6PDQ2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC18.32■□□□□ 0.52
Chd4Q6PDQ2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC18.32■□□□□ 0.52
Chd4Q6PDQ2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd4Q6PDQ2 Gm10605-202ENSMUST00000183019 3198 ntBASIC18.32■□□□□ 0.52
Chd4Q6PDQ2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd4Q6PDQ2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Chd4Q6PDQ2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd4Q6PDQ2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Chd4Q6PDQ2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms