Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf8Q6DID3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.63■□□□□ 0.25
Scaf8Q6DID3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Gm38671-201ENSMUST00000200573 130 ntBASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Gm7619-201ENSMUST00000210649 1282 ntBASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Gm6013-201ENSMUST00000212264 699 ntBASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf8Q6DID3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Gm27514-201ENSMUST00000183692 110 ntBASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Gm45930-201ENSMUST00000221330 292 ntBASIC16.62■□□□□ 0.25
Scaf8Q6DID3 CT009764.1-201ENSMUST00000222260 483 ntBASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Gm10012-201ENSMUST00000078252 192 ntBASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf8Q6DID3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Gm11524-201ENSMUST00000119349 807 ntBASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Gm43822-201ENSMUST00000200285 476 ntBASIC16.61■□□□□ 0.25
Scaf8Q6DID3 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Gm17383-201ENSMUST00000078739 1041 ntBASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scaf8Q6DID3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms