Protein–RNA interactions for Protein: Q68FE2

Atg9a, Autophagy-related protein 9A, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg9aQ68FE2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Gm28631-201ENSMUST00000190740 334 ntBASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atg9aQ68FE2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Atg9aQ68FE2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Gm6912-201ENSMUST00000117218 544 ntBASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Gm45668-201ENSMUST00000211271 493 ntBASIC17.1■□□□□ 0.33
Atg9aQ68FE2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Gm6180-201ENSMUST00000065243 498 ntBASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Mir497b-201ENSMUST00000093601 125 ntBASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg9aQ68FE2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg9aQ68FE2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg9aQ68FE2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Atg9aQ68FE2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg9aQ68FE2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg9aQ68FE2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.09■□□□□ 0.33
Atg9aQ68FE2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg9aQ68FE2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg9aQ68FE2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg9aQ68FE2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg9aQ68FE2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atg9aQ68FE2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg9aQ68FE2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17.09■□□□□ 0.33
Atg9aQ68FE2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.09■□□□□ 0.33
Atg9aQ68FE2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atg9aQ68FE2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms