Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.06■□□□□ 0
Scube3Q66PY1 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Scube3Q66PY1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scube3Q66PY1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.06■□□□□ 0
Scube3Q66PY1 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.05■□□□□ 0
Scube3Q66PY1 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.05■□□□□ 0
Scube3Q66PY1 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Scube3Q66PY1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.05■□□□□ 0
Scube3Q66PY1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.05■□□□□ 0
Scube3Q66PY1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.05■□□□□ 0
Scube3Q66PY1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Scube3Q66PY1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Scube3Q66PY1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.05■□□□□ 0
Scube3Q66PY1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Scube3Q66PY1 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Scube3Q66PY1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Scube3Q66PY1 Mir1897-201ENSMUST00000122581 272 ntBASIC15.05■□□□□ -0
Scube3Q66PY1 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.05■□□□□ -0
Scube3Q66PY1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.05■□□□□ -0
Scube3Q66PY1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.05■□□□□ -0
Scube3Q66PY1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Scube3Q66PY1 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.05■□□□□ -0
Scube3Q66PY1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.05■□□□□ -0
Scube3Q66PY1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.05■□□□□ -0
Scube3Q66PY1 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.05■□□□□ -0
Scube3Q66PY1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.05■□□□□ -0
Scube3Q66PY1 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.05■□□□□ -0
Scube3Q66PY1 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.05■□□□□ -0
Scube3Q66PY1 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.05■□□□□ -0
Scube3Q66PY1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.05■□□□□ -0
Scube3Q66PY1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scube3Q66PY1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scube3Q66PY1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scube3Q66PY1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scube3Q66PY1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.05■□□□□ -0
Scube3Q66PY1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scube3Q66PY1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scube3Q66PY1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scube3Q66PY1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Scube3Q66PY1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.04■□□□□ -0
Scube3Q66PY1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.04■□□□□ -0
Scube3Q66PY1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Scube3Q66PY1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.04■□□□□ -0
Scube3Q66PY1 Gm12134-201ENSMUST00000122109 520 ntBASIC15.04■□□□□ -0
Scube3Q66PY1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Scube3Q66PY1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.04■□□□□ -0
Scube3Q66PY1 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.04■□□□□ -0
Scube3Q66PY1 Gm16476-201ENSMUST00000221544 139 ntBASIC15.04■□□□□ -0
Scube3Q66PY1 Dupd1-202ENSMUST00000224735 548 ntBASIC15.04■□□□□ -0
Scube3Q66PY1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Scube3Q66PY1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Scube3Q66PY1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scube3Q66PY1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scube3Q66PY1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scube3Q66PY1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Scube3Q66PY1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scube3Q66PY1 BC001981-202ENSMUST00000191393 1545 ntBASIC15.03■□□□□ -0
Scube3Q66PY1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scube3Q66PY1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scube3Q66PY1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scube3Q66PY1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scube3Q66PY1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Scube3Q66PY1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Scube3Q66PY1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Scube3Q66PY1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms