Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.09■□□□□ 0.49
Clcn1Q64347 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.09■□□□□ 0.49
Clcn1Q64347 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Clcn1Q64347 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn1Q64347 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.08■□□□□ 0.49
Clcn1Q64347 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clcn1Q64347 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
Clcn1Q64347 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clcn1Q64347 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clcn1Q64347 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clcn1Q64347 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn1Q64347 Gm12585-201ENSMUST00000117307 290 ntBASIC18.08■□□□□ 0.48
Clcn1Q64347 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC18.08■□□□□ 0.48
Clcn1Q64347 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC18.08■□□□□ 0.48
Clcn1Q64347 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn1Q64347 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn1Q64347 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC18.08■□□□□ 0.48
Clcn1Q64347 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC18.08■□□□□ 0.48
Clcn1Q64347 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Clcn1Q64347 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn1Q64347 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn1Q64347 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Clcn1Q64347 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn1Q64347 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn1Q64347 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn1Q64347 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn1Q64347 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn1Q64347 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Clcn1Q64347 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.07■□□□□ 0.48
Clcn1Q64347 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Clcn1Q64347 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Gm15393-201ENSMUST00000120499 219 ntBASIC18.07■□□□□ 0.48
Clcn1Q64347 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC18.07■□□□□ 0.48
Clcn1Q64347 CT030657.3-201ENSMUST00000222707 1200 ntBASIC18.07■□□□□ 0.48
Clcn1Q64347 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Clcn1Q64347 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Clcn1Q64347 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.07■□□□□ 0.48
Clcn1Q64347 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn1Q64347 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.06■□□□□ 0.48
Clcn1Q64347 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Gm12341-201ENSMUST00000119724 503 ntBASIC18.06■□□□□ 0.48
Clcn1Q64347 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC18.06■□□□□ 0.48
Clcn1Q64347 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Clcn1Q64347 Ighv1-25-201ENSMUST00000195638 345 ntBASIC18.06■□□□□ 0.48
Clcn1Q64347 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.06■□□□□ 0.48
Clcn1Q64347 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.06■□□□□ 0.48
Clcn1Q64347 AC123645.1-201ENSMUST00000228469 605 ntBASIC18.06■□□□□ 0.48
Clcn1Q64347 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Sybu-209ENSMUST00000228639 4113 ntBASIC18.06■□□□□ 0.48
Clcn1Q64347 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn1Q64347 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn1Q64347 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Clcn1Q64347 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn1Q64347 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn1Q64347 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms