Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AtmQ62388 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
AtmQ62388 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
AtmQ62388 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
AtmQ62388 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
AtmQ62388 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
AtmQ62388 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
AtmQ62388 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
AtmQ62388 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
AtmQ62388 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.26□□□□□ -0.29
AtmQ62388 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.26□□□□□ -0.29
AtmQ62388 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
AtmQ62388 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
AtmQ62388 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.26□□□□□ -0.29
AtmQ62388 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.26□□□□□ -0.29
AtmQ62388 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.26□□□□□ -0.29
AtmQ62388 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.26□□□□□ -0.29
AtmQ62388 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.26□□□□□ -0.29
AtmQ62388 Gm24255-201ENSMUST00000104481 128 ntBASIC13.26□□□□□ -0.29
AtmQ62388 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
AtmQ62388 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.26□□□□□ -0.29
AtmQ62388 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
AtmQ62388 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 Gm4909-201ENSMUST00000118749 794 ntBASIC13.25□□□□□ -0.29
AtmQ62388 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.25□□□□□ -0.29
AtmQ62388 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.25□□□□□ -0.29
AtmQ62388 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.25□□□□□ -0.29
AtmQ62388 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
AtmQ62388 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.25□□□□□ -0.29
AtmQ62388 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.25□□□□□ -0.29
AtmQ62388 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.25□□□□□ -0.29
AtmQ62388 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.25□□□□□ -0.29
AtmQ62388 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.25□□□□□ -0.29
AtmQ62388 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.25□□□□□ -0.29
AtmQ62388 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AtmQ62388 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AtmQ62388 Gm8566-201ENSMUST00000120174 465 ntBASIC13.24□□□□□ -0.29
AtmQ62388 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AtmQ62388 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
AtmQ62388 Rps4l-202ENSMUST00000204242 789 ntBASIC13.24□□□□□ -0.29
AtmQ62388 Gm18473-201ENSMUST00000220543 868 ntBASIC13.24□□□□□ -0.29
AtmQ62388 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
AtmQ62388 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AtmQ62388 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AtmQ62388 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AtmQ62388 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.24□□□□□ -0.29
AtmQ62388 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
AtmQ62388 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AtmQ62388 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
AtmQ62388 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AtmQ62388 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AtmQ62388 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
AtmQ62388 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
AtmQ62388 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
AtmQ62388 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
AtmQ62388 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.24□□□□□ -0.29
AtmQ62388 Gm7029-201ENSMUST00000173226 450 ntBASIC13.24□□□□□ -0.29
AtmQ62388 Gm44397-201ENSMUST00000195950 113 ntBASIC13.24□□□□□ -0.29
AtmQ62388 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AtmQ62388 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.24□□□□□ -0.29
AtmQ62388 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms