Protein–RNA interactions for Protein: Q62255

Sall3, Sal-like protein 3, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sall3Q62255 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sall3Q62255 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sall3Q62255 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sall3Q62255 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sall3Q62255 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sall3Q62255 AC154412.1-201ENSMUST00000226540 2786 ntBASIC19.82■□□□□ 0.76
Sall3Q62255 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sall3Q62255 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sall3Q62255 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Sall3Q62255 Gm9200-201ENSMUST00000118513 1354 ntBASIC19.82■□□□□ 0.76
Sall3Q62255 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sall3Q62255 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sall3Q62255 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sall3Q62255 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sall3Q62255 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sall3Q62255 Gm37015-201ENSMUST00000192763 1521 ntBASIC19.82■□□□□ 0.76
Sall3Q62255 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sall3Q62255 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sall3Q62255 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Sall3Q62255 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Sall3Q62255 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sall3Q62255 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC19.81■□□□□ 0.76
Sall3Q62255 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
Sall3Q62255 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sall3Q62255 Ighv1-51-201ENSMUST00000192903 354 ntBASIC19.81■□□□□ 0.76
Sall3Q62255 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Sall3Q62255 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Sall3Q62255 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Sall3Q62255 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sall3Q62255 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sall3Q62255 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sall3Q62255 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sall3Q62255 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sall3Q62255 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sall3Q62255 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sall3Q62255 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sall3Q62255 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sall3Q62255 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC19.81■□□□□ 0.76
Sall3Q62255 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sall3Q62255 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sall3Q62255 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sall3Q62255 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC19.8■□□□□ 0.76
Sall3Q62255 Gm11814-201ENSMUST00000119515 929 ntBASIC19.8■□□□□ 0.76
Sall3Q62255 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC19.8■□□□□ 0.76
Sall3Q62255 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sall3Q62255 Gm27486-201ENSMUST00000184923 80 ntBASIC19.8■□□□□ 0.76
Sall3Q62255 Gm29127-201ENSMUST00000188304 517 ntBASIC19.8■□□□□ 0.76
Sall3Q62255 Gm45784-201ENSMUST00000188360 142 ntBASIC19.8■□□□□ 0.76
Sall3Q62255 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sall3Q62255 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sall3Q62255 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sall3Q62255 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
Sall3Q62255 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sall3Q62255 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sall3Q62255 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sall3Q62255 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sall3Q62255 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sall3Q62255 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sall3Q62255 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Sall3Q62255 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sall3Q62255 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sall3Q62255 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sall3Q62255 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Sall3Q62255 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Sall3Q62255 Gm23931-201ENSMUST00000103842 109 ntBASIC19.79■□□□□ 0.76
Sall3Q62255 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sall3Q62255 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC19.79■□□□□ 0.76
Sall3Q62255 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC19.79■□□□□ 0.76
Sall3Q62255 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Sall3Q62255 Gm37424-201ENSMUST00000191727 561 ntBASIC19.79■□□□□ 0.76
Sall3Q62255 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC19.79■□□□□ 0.76
Sall3Q62255 AC125117.1-201ENSMUST00000228121 468 ntBASIC19.79■□□□□ 0.76
Sall3Q62255 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sall3Q62255 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Sall3Q62255 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sall3Q62255 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sall3Q62255 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sall3Q62255 AC161252.3-201ENSMUST00000225465 1549 ntBASIC19.79■□□□□ 0.76
Sall3Q62255 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sall3Q62255 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sall3Q62255 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sall3Q62255 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sall3Q62255 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sall3Q62255 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sall3Q62255 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sall3Q62255 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sall3Q62255 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sall3Q62255 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
Sall3Q62255 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Sall3Q62255 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC19.78■□□□□ 0.76
Sall3Q62255 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sall3Q62255 Gm10012-201ENSMUST00000078252 192 ntBASIC19.78■□□□□ 0.76
Sall3Q62255 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC19.78■□□□□ 0.76
Sall3Q62255 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sall3Q62255 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sall3Q62255 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sall3Q62255 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sall3Q62255 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sall3Q62255 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sall3Q62255 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms