Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Six3Q62233 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Six3Q62233 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Six3Q62233 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Six3Q62233 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Six3Q62233 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Six3Q62233 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Six3Q62233 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Six3Q62233 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Gm6973-201ENSMUST00000117080 721 ntBASIC13.98□□□□□ -0.17
Six3Q62233 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.98□□□□□ -0.17
Six3Q62233 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
Six3Q62233 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.98□□□□□ -0.17
Six3Q62233 Mir3113-201ENSMUST00000175478 76 ntBASIC13.98□□□□□ -0.17
Six3Q62233 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.98□□□□□ -0.17
Six3Q62233 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.98□□□□□ -0.17
Six3Q62233 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.98□□□□□ -0.17
Six3Q62233 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.98□□□□□ -0.17
Six3Q62233 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.98□□□□□ -0.17
Six3Q62233 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.98□□□□□ -0.17
Six3Q62233 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six3Q62233 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six3Q62233 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six3Q62233 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six3Q62233 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Six3Q62233 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Six3Q62233 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Six3Q62233 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six3Q62233 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six3Q62233 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six3Q62233 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Six3Q62233 Mir8117-201ENSMUST00000184773 107 ntBASIC13.97□□□□□ -0.17
Six3Q62233 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six3Q62233 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six3Q62233 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.97□□□□□ -0.17
Six3Q62233 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six3Q62233 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Six3Q62233 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Six3Q62233 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.97□□□□□ -0.17
Six3Q62233 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six3Q62233 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Six3Q62233 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Six3Q62233 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six3Q62233 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six3Q62233 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six3Q62233 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six3Q62233 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six3Q62233 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Six3Q62233 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six3Q62233 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six3Q62233 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.96□□□□□ -0.17
Six3Q62233 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six3Q62233 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six3Q62233 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six3Q62233 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six3Q62233 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six3Q62233 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six3Q62233 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six3Q62233 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Six3Q62233 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six3Q62233 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Six3Q62233 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms