Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.17□□□□□ -0.3
VcanQ62059 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.17□□□□□ -0.3
VcanQ62059 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VcanQ62059 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.16□□□□□ -0.3
VcanQ62059 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.16□□□□□ -0.3
VcanQ62059 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
VcanQ62059 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
VcanQ62059 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
VcanQ62059 Gm16479-201ENSMUST00000121706 932 ntBASIC13.16□□□□□ -0.3
VcanQ62059 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.16□□□□□ -0.3
VcanQ62059 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.16□□□□□ -0.3
VcanQ62059 Gm7046-201ENSMUST00000221351 977 ntBASIC13.16□□□□□ -0.3
VcanQ62059 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.16□□□□□ -0.3
VcanQ62059 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
VcanQ62059 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.16□□□□□ -0.3
VcanQ62059 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VcanQ62059 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
VcanQ62059 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
VcanQ62059 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.15□□□□□ -0.3
VcanQ62059 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.15□□□□□ -0.3
VcanQ62059 Gm18473-201ENSMUST00000220543 868 ntBASIC13.15□□□□□ -0.3
VcanQ62059 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
VcanQ62059 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
VcanQ62059 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.15□□□□□ -0.3
VcanQ62059 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.15□□□□□ -0.3
VcanQ62059 Gm43094-201ENSMUST00000196549 921 ntBASIC13.15□□□□□ -0.3
VcanQ62059 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.15□□□□□ -0.3
VcanQ62059 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.15□□□□□ -0.3
VcanQ62059 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.15□□□□□ -0.3
VcanQ62059 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VcanQ62059 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
VcanQ62059 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
VcanQ62059 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VcanQ62059 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VcanQ62059 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VcanQ62059 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
VcanQ62059 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.14□□□□□ -0.31
VcanQ62059 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VcanQ62059 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VcanQ62059 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.14□□□□□ -0.31
VcanQ62059 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
VcanQ62059 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VcanQ62059 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VcanQ62059 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VcanQ62059 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VcanQ62059 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VcanQ62059 Gm23200-201ENSMUST00000104379 132 ntBASIC13.14□□□□□ -0.31
VcanQ62059 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.14□□□□□ -0.31
VcanQ62059 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.14□□□□□ -0.31
VcanQ62059 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.14□□□□□ -0.31
VcanQ62059 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms