Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ctr9Q62018 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ctr9Q62018 Gm14719-201ENSMUST00000121891 340 ntBASIC16.86■□□□□ 0.29
Ctr9Q62018 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ctr9Q62018 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ctr9Q62018 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ctr9Q62018 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.86■□□□□ 0.29
Ctr9Q62018 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ctr9Q62018 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ctr9Q62018 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ctr9Q62018 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.86■□□□□ 0.29
Ctr9Q62018 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ctr9Q62018 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ctr9Q62018 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ctr9Q62018 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ctr9Q62018 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ctr9Q62018 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ctr9Q62018 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ctr9Q62018 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ctr9Q62018 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.85■□□□□ 0.29
Ctr9Q62018 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Ctr9Q62018 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ctr9Q62018 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ctr9Q62018 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.85■□□□□ 0.29
Ctr9Q62018 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ctr9Q62018 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ctr9Q62018 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ctr9Q62018 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.85■□□□□ 0.29
Ctr9Q62018 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.85■□□□□ 0.29
Ctr9Q62018 Gm12882-201ENSMUST00000121696 517 ntBASIC16.85■□□□□ 0.29
Ctr9Q62018 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.85■□□□□ 0.29
Ctr9Q62018 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.85■□□□□ 0.29
Ctr9Q62018 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ctr9Q62018 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ctr9Q62018 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Ctr9Q62018 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ctr9Q62018 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ctr9Q62018 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.85■□□□□ 0.29
Ctr9Q62018 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ctr9Q62018 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ctr9Q62018 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ctr9Q62018 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ctr9Q62018 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.85■□□□□ 0.29
Ctr9Q62018 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ctr9Q62018 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ctr9Q62018 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ctr9Q62018 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Gm27437-201ENSMUST00000183429 107 ntBASIC16.84■□□□□ 0.29
Ctr9Q62018 Mir6977-201ENSMUST00000184960 64 ntBASIC16.84■□□□□ 0.29
Ctr9Q62018 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.84■□□□□ 0.29
Ctr9Q62018 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.84■□□□□ 0.29
Ctr9Q62018 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.84■□□□□ 0.29
Ctr9Q62018 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.84■□□□□ 0.29
Ctr9Q62018 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.84■□□□□ 0.29
Ctr9Q62018 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.84■□□□□ 0.29
Ctr9Q62018 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.84■□□□□ 0.29
Ctr9Q62018 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ctr9Q62018 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ctr9Q62018 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ctr9Q62018 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.84■□□□□ 0.29
Ctr9Q62018 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ctr9Q62018 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Ctr9Q62018 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ctr9Q62018 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ctr9Q62018 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ctr9Q62018 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 Gm4875-201ENSMUST00000118257 786 ntBASIC16.83■□□□□ 0.28
Ctr9Q62018 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.83■□□□□ 0.28
Ctr9Q62018 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms