Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC10.61□□□□□ -0.71
Foxc1Q61572 Gm16026-204ENSMUST00000162652 683 ntBASIC10.61□□□□□ -0.71
Foxc1Q61572 Mir6956-201ENSMUST00000183598 62 ntBASIC10.61□□□□□ -0.71
Foxc1Q61572 Gm37604-201ENSMUST00000191749 1272 ntBASIC10.61□□□□□ -0.71
Foxc1Q61572 Gm40332-201ENSMUST00000199847 938 ntBASIC10.61□□□□□ -0.71
Foxc1Q61572 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.61□□□□□ -0.71
Foxc1Q61572 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.61□□□□□ -0.71
Foxc1Q61572 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC10.61□□□□□ -0.71
Foxc1Q61572 Gm44683-201ENSMUST00000209088 484 ntBASIC10.61□□□□□ -0.71
Foxc1Q61572 AC164567.1-201ENSMUST00000219185 960 ntBASIC10.61□□□□□ -0.71
Foxc1Q61572 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC10.61□□□□□ -0.71
Foxc1Q61572 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Foxc1Q61572 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Nrn1-204ENSMUST00000224323 1779 ntBASIC10.61□□□□□ -0.71
Foxc1Q61572 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Foxc1Q61572 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Foxc1Q61572 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.61□□□□□ -0.71
Foxc1Q61572 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Foxc1Q61572 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Foxc1Q61572 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.61□□□□□ -0.71
Foxc1Q61572 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Foxc1Q61572 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Foxc1Q61572 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC10.6□□□□□ -0.71
Foxc1Q61572 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.6□□□□□ -0.71
Foxc1Q61572 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Foxc1Q61572 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC10.6□□□□□ -0.71
Foxc1Q61572 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Foxc1Q61572 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Gm12892-201ENSMUST00000117367 1146 ntBASIC10.6□□□□□ -0.71
Foxc1Q61572 Gm5970-201ENSMUST00000131638 1216 ntBASIC10.6□□□□□ -0.71
Foxc1Q61572 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC10.6□□□□□ -0.71
Foxc1Q61572 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC10.6□□□□□ -0.71
Foxc1Q61572 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC10.6□□□□□ -0.71
Foxc1Q61572 Gm45612-201ENSMUST00000211320 160 ntBASIC10.6□□□□□ -0.71
Foxc1Q61572 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Gm8396-201ENSMUST00000057361 823 ntBASIC10.6□□□□□ -0.71
Foxc1Q61572 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Foxc1Q61572 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.6□□□□□ -0.71
Foxc1Q61572 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.6□□□□□ -0.71
Foxc1Q61572 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Foxc1Q61572 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC10.6□□□□□ -0.71
Foxc1Q61572 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Foxc1Q61572 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Foxc1Q61572 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC10.59□□□□□ -0.71
Foxc1Q61572 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Foxc1Q61572 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Foxc1Q61572 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Gm6226-201ENSMUST00000117765 1146 ntBASIC10.59□□□□□ -0.71
Foxc1Q61572 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Foxc1Q61572 Rpph1-201ENSMUST00000175096 319 ntBASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms