Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a1Q61245 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.71■□□□□ 0.11
Col11a1Q61245 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.71■□□□□ 0.11
Col11a1Q61245 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col11a1Q61245 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.71■□□□□ 0.1
Col11a1Q61245 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a1Q61245 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Col11a1Q61245 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a1Q61245 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a1Q61245 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.71■□□□□ 0.1
Col11a1Q61245 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.71■□□□□ 0.1
Col11a1Q61245 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.71■□□□□ 0.1
Col11a1Q61245 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Col11a1Q61245 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a1Q61245 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col11a1Q61245 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Col11a1Q61245 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Col11a1Q61245 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 Gm17376-201ENSMUST00000166016 84 ntBASIC15.7■□□□□ 0.1
Col11a1Q61245 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.7■□□□□ 0.1
Col11a1Q61245 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.7■□□□□ 0.1
Col11a1Q61245 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Col11a1Q61245 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Col11a1Q61245 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.7■□□□□ 0.1
Col11a1Q61245 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col11a1Q61245 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col11a1Q61245 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col11a1Q61245 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col11a1Q61245 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col11a1Q61245 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col11a1Q61245 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.69■□□□□ 0.1
Col11a1Q61245 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.69■□□□□ 0.1
Col11a1Q61245 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col11a1Q61245 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col11a1Q61245 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col11a1Q61245 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.69■□□□□ 0.1
Col11a1Q61245 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col11a1Q61245 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.69■□□□□ 0.1
Col11a1Q61245 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.69■□□□□ 0.1
Col11a1Q61245 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.69■□□□□ 0.1
Col11a1Q61245 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.69■□□□□ 0.1
Col11a1Q61245 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col11a1Q61245 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.69■□□□□ 0.1
Col11a1Q61245 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Col11a1Q61245 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col11a1Q61245 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col11a1Q61245 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.69■□□□□ 0.1
Col11a1Q61245 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Col11a1Q61245 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Col11a1Q61245 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col11a1Q61245 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col11a1Q61245 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col11a1Q61245 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col11a1Q61245 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col11a1Q61245 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.68■□□□□ 0.1
Col11a1Q61245 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.68■□□□□ 0.1
Col11a1Q61245 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.68■□□□□ 0.1
Col11a1Q61245 Gm2445-201ENSMUST00000182798 989 ntBASIC15.68■□□□□ 0.1
Col11a1Q61245 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.68■□□□□ 0.1
Col11a1Q61245 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.68■□□□□ 0.1
Col11a1Q61245 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.68■□□□□ 0.1
Col11a1Q61245 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col11a1Q61245 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.68■□□□□ 0.1
Col11a1Q61245 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Col11a1Q61245 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col11a1Q61245 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Col11a1Q61245 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col11a1Q61245 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col11a1Q61245 Gm14350-201ENSMUST00000116642 640 ntBASIC15.68■□□□□ 0.1
Col11a1Q61245 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.68■□□□□ 0.1
Col11a1Q61245 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col11a1Q61245 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.68■□□□□ 0.1
Col11a1Q61245 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.68■□□□□ 0.1
Col11a1Q61245 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Col11a1Q61245 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.68■□□□□ 0.1
Col11a1Q61245 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col11a1Q61245 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col11a1Q61245 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col11a1Q61245 Gm18753-201ENSMUST00000201000 566 ntBASIC15.68■□□□□ 0.1
Col11a1Q61245 Rps4l-202ENSMUST00000204242 789 ntBASIC15.68■□□□□ 0.1
Col11a1Q61245 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.68■□□□□ 0.1
Col11a1Q61245 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.68■□□□□ 0.1
Col11a1Q61245 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms