Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.89□□□□□ -0.51
Hcfc1Q61191 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.89□□□□□ -0.51
Hcfc1Q61191 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.89□□□□□ -0.51
Hcfc1Q61191 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.89□□□□□ -0.51
Hcfc1Q61191 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.89□□□□□ -0.51
Hcfc1Q61191 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcfc1Q61191 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.88□□□□□ -0.51
Hcfc1Q61191 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Gm8927-201ENSMUST00000181978 981 ntBASIC11.88□□□□□ -0.51
Hcfc1Q61191 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Gm27572-201ENSMUST00000183702 255 ntBASIC11.88□□□□□ -0.51
Hcfc1Q61191 Gm3222-201ENSMUST00000071282 990 ntBASIC11.88□□□□□ -0.51
Hcfc1Q61191 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Hcfc1Q61191 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcfc1Q61191 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.87□□□□□ -0.51
Hcfc1Q61191 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Gm8810-201ENSMUST00000172895 754 ntBASIC11.87□□□□□ -0.51
Hcfc1Q61191 Gm24420-201ENSMUST00000176676 59 ntBASIC11.87□□□□□ -0.51
Hcfc1Q61191 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.87□□□□□ -0.51
Hcfc1Q61191 Gm7399-201ENSMUST00000032395 858 ntBASIC11.87□□□□□ -0.51
Hcfc1Q61191 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.87□□□□□ -0.51
Hcfc1Q61191 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms