Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col12a1Q60847 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col12a1Q60847 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Gm15371-201ENSMUST00000117057 784 ntBASIC13.84□□□□□ -0.19
Col12a1Q60847 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col12a1Q60847 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.84□□□□□ -0.19
Col12a1Q60847 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.84□□□□□ -0.19
Col12a1Q60847 Gm8927-201ENSMUST00000181978 981 ntBASIC13.84□□□□□ -0.19
Col12a1Q60847 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.84□□□□□ -0.19
Col12a1Q60847 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.84□□□□□ -0.19
Col12a1Q60847 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col12a1Q60847 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.83□□□□□ -0.2
Col12a1Q60847 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.83□□□□□ -0.2
Col12a1Q60847 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.83□□□□□ -0.2
Col12a1Q60847 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.83□□□□□ -0.2
Col12a1Q60847 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Col12a1Q60847 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Gm12882-201ENSMUST00000121696 517 ntBASIC13.83□□□□□ -0.2
Col12a1Q60847 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Col12a1Q60847 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.83□□□□□ -0.2
Col12a1Q60847 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.83□□□□□ -0.2
Col12a1Q60847 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Col12a1Q60847 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col12a1Q60847 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.82□□□□□ -0.2
Col12a1Q60847 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Col12a1Q60847 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Col12a1Q60847 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.82□□□□□ -0.2
Col12a1Q60847 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.82□□□□□ -0.2
Col12a1Q60847 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 Gm15957-201ENSMUST00000118893 974 ntBASIC13.82□□□□□ -0.2
Col12a1Q60847 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.82□□□□□ -0.2
Col12a1Q60847 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col12a1Q60847 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col12a1Q60847 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col12a1Q60847 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.82□□□□□ -0.2
Col12a1Q60847 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col12a1Q60847 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.81□□□□□ -0.2
Col12a1Q60847 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Col12a1Q60847 Gm25668-201ENSMUST00000157700 129 ntBASIC13.81□□□□□ -0.2
Col12a1Q60847 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.81□□□□□ -0.2
Col12a1Q60847 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.81□□□□□ -0.2
Col12a1Q60847 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.81□□□□□ -0.2
Col12a1Q60847 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.81□□□□□ -0.2
Col12a1Q60847 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Col12a1Q60847 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Col12a1Q60847 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Gm27772-201ENSMUST00000184900 187 ntBASIC13.81□□□□□ -0.2
Col12a1Q60847 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.81□□□□□ -0.2
Col12a1Q60847 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms