Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.65□□□□□ -0.22
Nr1h4Q60641 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Gm7862-201ENSMUST00000121461 292 ntBASIC13.65□□□□□ -0.22
Nr1h4Q60641 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nr1h4Q60641 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.65□□□□□ -0.22
Nr1h4Q60641 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nr1h4Q60641 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nr1h4Q60641 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nr1h4Q60641 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nr1h4Q60641 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.64□□□□□ -0.23
Nr1h4Q60641 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.64□□□□□ -0.23
Nr1h4Q60641 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nr1h4Q60641 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.63□□□□□ -0.23
Nr1h4Q60641 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.63□□□□□ -0.23
Nr1h4Q60641 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.63□□□□□ -0.23
Nr1h4Q60641 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.63□□□□□ -0.23
Nr1h4Q60641 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.63□□□□□ -0.23
Nr1h4Q60641 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nr1h4Q60641 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms