Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom1Q5SX79 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Gm4875-201ENSMUST00000118257 786 ntBASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom1Q5SX79 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Gm9726-201ENSMUST00000180321 678 ntBASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Gm28631-201ENSMUST00000190740 334 ntBASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shroom1Q5SX79 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Shroom1Q5SX79 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.21■□□□□ 0.02
Shroom1Q5SX79 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shroom1Q5SX79 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Shroom1Q5SX79 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms