Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-3Q5R1C3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Gm5587-201ENSMUST00000206270 674 ntBASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 AC153881.2-201ENSMUST00000214877 204 ntBASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav3-3Q5R1C3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Gm6623-201ENSMUST00000173570 544 ntBASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms