Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim80Q3V061 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Trim80Q3V061 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim80Q3V061 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.82□□□□□ -0.04
Trim80Q3V061 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.82□□□□□ -0.04
Trim80Q3V061 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trim80Q3V061 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim80Q3V061 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim80Q3V061 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim80Q3V061 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim80Q3V061 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim80Q3V061 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim80Q3V061 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim80Q3V061 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim80Q3V061 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim80Q3V061 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim80Q3V061 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim80Q3V061 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim80Q3V061 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Trim80Q3V061 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.81□□□□□ -0.04
Trim80Q3V061 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Trim80Q3V061 Gm4995-201ENSMUST00000117247 432 ntBASIC14.81□□□□□ -0.04
Trim80Q3V061 Gm15920-201ENSMUST00000118998 402 ntBASIC14.81□□□□□ -0.04
Trim80Q3V061 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim80Q3V061 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim80Q3V061 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim80Q3V061 Gm18622-201ENSMUST00000219361 595 ntBASIC14.81□□□□□ -0.04
Trim80Q3V061 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.81□□□□□ -0.04
Trim80Q3V061 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.81□□□□□ -0.04
Trim80Q3V061 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim80Q3V061 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim80Q3V061 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim80Q3V061 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim80Q3V061 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim80Q3V061 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim80Q3V061 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim80Q3V061 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim80Q3V061 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim80Q3V061 Gm7063-201ENSMUST00000186840 981 ntBASIC14.8□□□□□ -0.04
Trim80Q3V061 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim80Q3V061 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim80Q3V061 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim80Q3V061 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.8□□□□□ -0.04
Trim80Q3V061 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim80Q3V061 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim80Q3V061 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim80Q3V061 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim80Q3V061 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.8□□□□□ -0.04
Trim80Q3V061 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim80Q3V061 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim80Q3V061 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim80Q3V061 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim80Q3V061 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim80Q3V061 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim80Q3V061 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim80Q3V061 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim80Q3V061 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim80Q3V061 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim80Q3V061 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim80Q3V061 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim80Q3V061 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim80Q3V061 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim80Q3V061 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Trim80Q3V061 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim80Q3V061 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.79□□□□□ -0.04
Trim80Q3V061 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trim80Q3V061 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim80Q3V061 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim80Q3V061 Gm25911-201ENSMUST00000157621 56 ntBASIC14.79□□□□□ -0.04
Trim80Q3V061 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim80Q3V061 Gm8318-201ENSMUST00000182954 872 ntBASIC14.79□□□□□ -0.04
Trim80Q3V061 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim80Q3V061 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim80Q3V061 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.79□□□□□ -0.04
Trim80Q3V061 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim80Q3V061 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim80Q3V061 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim80Q3V061 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim80Q3V061 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim80Q3V061 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim80Q3V061 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms