Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Gm18669-201ENSMUST00000216049 778 ntBASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim40Q3UWA4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Gm4535-201ENSMUST00000182274 558 ntBASIC13.42□□□□□ -0.26
Trim40Q3UWA4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Gm10355-201ENSMUST00000097146 517 ntBASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.42□□□□□ -0.26
Trim40Q3UWA4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Gm11780-201ENSMUST00000136880 516 ntBASIC13.41□□□□□ -0.26
Trim40Q3UWA4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim40Q3UWA4 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim40Q3UWA4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim40Q3UWA4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim40Q3UWA4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms