Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Limch1Q3UH68 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Limch1Q3UH68 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.85■□□□□ 0.29
Limch1Q3UH68 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.85■□□□□ 0.29
Limch1Q3UH68 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.85■□□□□ 0.29
Limch1Q3UH68 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Limch1Q3UH68 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Limch1Q3UH68 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.84■□□□□ 0.29
Limch1Q3UH68 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.84■□□□□ 0.29
Limch1Q3UH68 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Limch1Q3UH68 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Limch1Q3UH68 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Limch1Q3UH68 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Limch1Q3UH68 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Limch1Q3UH68 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Limch1Q3UH68 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Limch1Q3UH68 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Limch1Q3UH68 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Limch1Q3UH68 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Limch1Q3UH68 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
Limch1Q3UH68 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Limch1Q3UH68 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Limch1Q3UH68 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Limch1Q3UH68 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Limch1Q3UH68 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.83■□□□□ 0.28
Limch1Q3UH68 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Limch1Q3UH68 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Limch1Q3UH68 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.83■□□□□ 0.28
Limch1Q3UH68 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Limch1Q3UH68 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Limch1Q3UH68 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.83■□□□□ 0.28
Limch1Q3UH68 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Limch1Q3UH68 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Limch1Q3UH68 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms