Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Puf60Q3UEB3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Puf60Q3UEB3 Gm6159-201ENSMUST00000191249 1724 ntBASIC19.53■□□□□ 0.72
Puf60Q3UEB3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Puf60Q3UEB3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Puf60Q3UEB3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Puf60Q3UEB3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Gm16425-201ENSMUST00000118143 3130 ntBASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Gm5303-201ENSMUST00000117943 1252 ntBASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Gm11524-201ENSMUST00000119349 807 ntBASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC19.52■□□□□ 0.72
Puf60Q3UEB3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Gm8463-201ENSMUST00000208573 613 ntBASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Mir497b-201ENSMUST00000093601 125 ntBASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Puf60Q3UEB3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Puf60Q3UEB3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Puf60Q3UEB3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Puf60Q3UEB3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Puf60Q3UEB3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Gm11425-201ENSMUST00000119608 498 ntBASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 AC192088.1-201ENSMUST00000227561 301 ntBASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Gm9396-201ENSMUST00000076703 567 ntBASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Puf60Q3UEB3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Mir692-1-201ENSMUST00000102263 109 ntBASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Puf60Q3UEB3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Gm26464-201ENSMUST00000157094 305 ntBASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms