Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.42□□□□□ -0.42
Q3U1D9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Q3U1D9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.42□□□□□ -0.42
Q3U1D9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Q3U1D9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Q3U1D9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.41□□□□□ -0.42
Q3U1D9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.41□□□□□ -0.42
Q3U1D9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Gm12585-201ENSMUST00000117307 290 ntBASIC12.41□□□□□ -0.42
Q3U1D9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.41□□□□□ -0.42
Q3U1D9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Q3U1D9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.41□□□□□ -0.42
Q3U1D9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.41□□□□□ -0.42
Q3U1D9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Q3U1D9 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.41□□□□□ -0.42
Q3U1D9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Q3U1D9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Q3U1D9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.4□□□□□ -0.42
Q3U1D9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Q3U1D9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Q3U1D9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.4□□□□□ -0.42
Q3U1D9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.4□□□□□ -0.42
Q3U1D9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Q3U1D9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.4□□□□□ -0.42
Q3U1D9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.4□□□□□ -0.42
Q3U1D9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Q3U1D9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Q3U1D9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Q3U1D9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Q3U1D9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Q3U1D9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Q3U1D9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.4□□□□□ -0.43
Q3U1D9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Q3U1D9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Q3U1D9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Q3U1D9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Q3U1D9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Q3U1D9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Q3U1D9 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.39□□□□□ -0.43
Q3U1D9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Q3U1D9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Q3U1D9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Q3U1D9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Q3U1D9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Q3U1D9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Q3U1D9 Gm15460-201ENSMUST00000118147 391 ntBASIC12.39□□□□□ -0.43
Q3U1D9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Q3U1D9 Gm15957-201ENSMUST00000118893 974 ntBASIC12.39□□□□□ -0.43
Q3U1D9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Q3U1D9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.39□□□□□ -0.43
Q3U1D9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.39□□□□□ -0.43
Q3U1D9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms