Protein–RNA interactions for Protein: Q3TIR1

Trappc13, Trafficking protein particle complex subunit 13, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13Q3TIR1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trappc13Q3TIR1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Gm12260-201ENSMUST00000122447 411 ntBASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Gm10275-202ENSMUST00000168697 495 ntBASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Gm10275-201ENSMUST00000092620 635 ntBASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trappc13Q3TIR1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Gm11543-201ENSMUST00000120758 370 ntBASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trappc13Q3TIR1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trappc13Q3TIR1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms