Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Q3KNL4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3KNL4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3KNL4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3KNL4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Q3KNL4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Q3KNL4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Q3KNL4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.08□□□□□ -0.16
Q3KNL4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.08□□□□□ -0.16
Q3KNL4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.08□□□□□ -0.16
Q3KNL4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.08□□□□□ -0.16
Q3KNL4 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Q3KNL4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3KNL4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Q3KNL4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3KNL4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3KNL4 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3KNL4 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3KNL4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3KNL4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Q3KNL4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3KNL4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Q3KNL4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3KNL4 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Q3KNL4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Q3KNL4 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3KNL4 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3KNL4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3KNL4 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Q3KNL4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3KNL4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3KNL4 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3KNL4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Q3KNL4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Q3KNL4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3KNL4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3KNL4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Q3KNL4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Q3KNL4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.07□□□□□ -0.16
Q3KNL4 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.07□□□□□ -0.16
Q3KNL4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3KNL4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.07□□□□□ -0.16
Q3KNL4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Q3KNL4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Q3KNL4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.07□□□□□ -0.16
Q3KNL4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Q3KNL4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3KNL4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.07□□□□□ -0.16
Q3KNL4 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.07□□□□□ -0.16
Q3KNL4 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.07□□□□□ -0.16
Q3KNL4 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.07□□□□□ -0.16
Q3KNL4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Q3KNL4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.06□□□□□ -0.16
Q3KNL4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Q3KNL4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Q3KNL4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.06□□□□□ -0.16
Q3KNL4 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Q3KNL4 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Q3KNL4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Q3KNL4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Q3KNL4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Q3KNL4 Gm18733-201ENSMUST00000173950 856 ntBASIC14.06□□□□□ -0.16
Q3KNL4 Gm5177-201ENSMUST00000183092 997 ntBASIC14.06□□□□□ -0.16
Q3KNL4 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.06□□□□□ -0.16
Q3KNL4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Q3KNL4 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Q3KNL4 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3KNL4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Q3KNL4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Q3KNL4 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3KNL4 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Q3KNL4 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Q3KNL4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Q3KNL4 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3KNL4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3KNL4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3KNL4 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Q3KNL4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3KNL4 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.05□□□□□ -0.16
Q3KNL4 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms