Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Gm9139-201ENSMUST00000218817 700 ntBASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Gm5434-202ENSMUST00000222384 1451 ntBASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Gm5434-201ENSMUST00000071825 1451 ntBASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Gm42511-201ENSMUST00000196160 234 ntBASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Gm25201-201ENSMUST00000083093 170 ntBASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Gm19680-201ENSMUST00000095050 1513 ntBASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ush2AQ2QI47 Gm15036-201ENSMUST00000118880 400 ntBASIC7.4□□□□□ -1.23
Ush2AQ2QI47 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Ush2AQ2QI47 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Ush2AQ2QI47 Gm44953-201ENSMUST00000208745 1286 ntBASIC7.4□□□□□ -1.23
Ush2AQ2QI47 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC7.4□□□□□ -1.23
Ush2AQ2QI47 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
Ush2AQ2QI47 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Ush2AQ2QI47 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Ush2AQ2QI47 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Ush2AQ2QI47 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC7.4□□□□□ -1.23
Ush2AQ2QI47 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
Ush2AQ2QI47 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Ush2AQ2QI47 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Ush2AQ2QI47 Ighv5-7-201ENSMUST00000192302 244 ntBASIC7.4□□□□□ -1.23
Ush2AQ2QI47 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC7.4□□□□□ -1.23
Ush2AQ2QI47 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Ush2AQ2QI47 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Gm7114-201ENSMUST00000190159 1789 ntBASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Gm43908-201ENSMUST00000205074 1472 ntBASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Gm3765-201ENSMUST00000130985 1447 ntBASIC7.39□□□□□ -1.23
Ush2AQ2QI47 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Gm5896-201ENSMUST00000189662 1024 ntBASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Gm19163-201ENSMUST00000223313 780 ntBASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Gm17208-201ENSMUST00000168388 535 ntBASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Mir6941-201ENSMUST00000184711 59 ntBASIC7.39□□□□□ -1.23
Ush2AQ2QI47 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms