Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxc4Q08624 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxc4Q08624 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.7□□□□□ -0.22
Hoxc4Q08624 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hoxc4Q08624 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.7□□□□□ -0.22
Hoxc4Q08624 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.7□□□□□ -0.22
Hoxc4Q08624 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Gm14928-201ENSMUST00000120198 477 ntBASIC13.7□□□□□ -0.22
Hoxc4Q08624 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Gm8515-201ENSMUST00000194852 576 ntBASIC13.7□□□□□ -0.22
Hoxc4Q08624 Gm5279-201ENSMUST00000199575 745 ntBASIC13.7□□□□□ -0.22
Hoxc4Q08624 Gm9794-201ENSMUST00000202370 423 ntBASIC13.7□□□□□ -0.22
Hoxc4Q08624 Gm17795-201ENSMUST00000214505 757 ntBASIC13.7□□□□□ -0.22
Hoxc4Q08624 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc4Q08624 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Gm11424-201ENSMUST00000121929 829 ntBASIC13.69□□□□□ -0.22
Hoxc4Q08624 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.69□□□□□ -0.22
Hoxc4Q08624 Gm18905-201ENSMUST00000205454 928 ntBASIC13.69□□□□□ -0.22
Hoxc4Q08624 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.69□□□□□ -0.22
Hoxc4Q08624 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Gm5186-201ENSMUST00000218781 920 ntBASIC13.69□□□□□ -0.22
Hoxc4Q08624 Gm18624-201ENSMUST00000220966 658 ntBASIC13.69□□□□□ -0.22
Hoxc4Q08624 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.69□□□□□ -0.22
Hoxc4Q08624 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc4Q08624 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hoxc4Q08624 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.68□□□□□ -0.22
Hoxc4Q08624 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Gm12490-201ENSMUST00000120255 560 ntBASIC13.68□□□□□ -0.22
Hoxc4Q08624 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.68□□□□□ -0.22
Hoxc4Q08624 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Gm24420-201ENSMUST00000176676 59 ntBASIC13.68□□□□□ -0.22
Hoxc4Q08624 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hoxc4Q08624 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.68□□□□□ -0.22
Hoxc4Q08624 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.68□□□□□ -0.22
Hoxc4Q08624 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Gm6180-201ENSMUST00000065243 498 ntBASIC13.68□□□□□ -0.22
Hoxc4Q08624 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.68□□□□□ -0.22
Hoxc4Q08624 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.68□□□□□ -0.22
Hoxc4Q08624 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc4Q08624 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms