Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Hspg2Q05793 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hspg2Q05793 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.3□□□□□ -0.76
Hspg2Q05793 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.3□□□□□ -0.76
Hspg2Q05793 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.3□□□□□ -0.76
Hspg2Q05793 Mir6979-201ENSMUST00000183927 56 ntBASIC10.3□□□□□ -0.76
Hspg2Q05793 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Gm44397-201ENSMUST00000195950 113 ntBASIC10.3□□□□□ -0.76
Hspg2Q05793 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.3□□□□□ -0.76
Hspg2Q05793 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.3□□□□□ -0.76
Hspg2Q05793 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.3□□□□□ -0.76
Hspg2Q05793 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.3□□□□□ -0.76
Hspg2Q05793 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.3□□□□□ -0.76
Hspg2Q05793 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Hspg2Q05793 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Gm29649-201ENSMUST00000185649 419 ntBASIC10.3□□□□□ -0.76
Hspg2Q05793 Gm29396-201ENSMUST00000185659 716 ntBASIC10.3□□□□□ -0.76
Hspg2Q05793 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC10.3□□□□□ -0.76
Hspg2Q05793 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Hspg2Q05793 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.3□□□□□ -0.76
Hspg2Q05793 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Hspg2Q05793 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Hspg2Q05793 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Hspg2Q05793 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Hspg2Q05793 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Hspg2Q05793 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.3□□□□□ -0.76
Hspg2Q05793 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Hspg2Q05793 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hspg2Q05793 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.29□□□□□ -0.76
Hspg2Q05793 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Hspg2Q05793 Gm13369-201ENSMUST00000119442 987 ntBASIC10.29□□□□□ -0.76
Hspg2Q05793 Gm13786-201ENSMUST00000122371 333 ntBASIC10.29□□□□□ -0.76
Hspg2Q05793 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.29□□□□□ -0.76
Hspg2Q05793 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC10.29□□□□□ -0.76
Hspg2Q05793 Olfr284-202ENSMUST00000206647 966 ntBASIC10.29□□□□□ -0.76
Hspg2Q05793 Gm13034-201ENSMUST00000121342 3177 ntBASIC10.29□□□□□ -0.76
Hspg2Q05793 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Hspg2Q05793 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.29□□□□□ -0.76
Hspg2Q05793 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.29□□□□□ -0.76
Hspg2Q05793 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Hspg2Q05793 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC10.29□□□□□ -0.76
Hspg2Q05793 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.29□□□□□ -0.76
Hspg2Q05793 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.29□□□□□ -0.76
Hspg2Q05793 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hspg2Q05793 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC10.29□□□□□ -0.76
Hspg2Q05793 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.28□□□□□ -0.76
Hspg2Q05793 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.28□□□□□ -0.76
Hspg2Q05793 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms