Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Gm6973-201ENSMUST00000117080 721 ntBASIC14.39□□□□□ -0.11
Pfdn6Q03958 Gm11779-201ENSMUST00000118541 368 ntBASIC14.39□□□□□ -0.11
Pfdn6Q03958 Gm14494-201ENSMUST00000118786 435 ntBASIC14.39□□□□□ -0.11
Pfdn6Q03958 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Gm27920-201ENSMUST00000183953 96 ntBASIC14.39□□□□□ -0.11
Pfdn6Q03958 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.39□□□□□ -0.11
Pfdn6Q03958 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.39□□□□□ -0.11
Pfdn6Q03958 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pfdn6Q03958 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.38□□□□□ -0.11
Pfdn6Q03958 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.38□□□□□ -0.11
Pfdn6Q03958 Gm15483-201ENSMUST00000120338 456 ntBASIC14.38□□□□□ -0.11
Pfdn6Q03958 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Gm5264-201ENSMUST00000190584 848 ntBASIC14.38□□□□□ -0.11
Pfdn6Q03958 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.38□□□□□ -0.11
Pfdn6Q03958 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn6Q03958 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pfdn6Q03958 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.37□□□□□ -0.11
Pfdn6Q03958 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.37□□□□□ -0.11
Pfdn6Q03958 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.37□□□□□ -0.11
Pfdn6Q03958 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn6Q03958 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms