Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Thumpd3P97770 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
Thumpd3P97770 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Thumpd3P97770 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.58□□□□□ -0.07
Thumpd3P97770 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.07
Thumpd3P97770 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Thumpd3P97770 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Thumpd3P97770 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Thumpd3P97770 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Thumpd3P97770 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd3P97770 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd3P97770 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Thumpd3P97770 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd3P97770 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd3P97770 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
Thumpd3P97770 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd3P97770 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd3P97770 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd3P97770 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd3P97770 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd3P97770 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.58□□□□□ -0.08
Thumpd3P97770 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.58□□□□□ -0.08
Thumpd3P97770 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Thumpd3P97770 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd3P97770 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.58□□□□□ -0.08
Thumpd3P97770 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.58□□□□□ -0.08
Thumpd3P97770 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Thumpd3P97770 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd3P97770 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Thumpd3P97770 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd3P97770 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd3P97770 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd3P97770 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Thumpd3P97770 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd3P97770 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd3P97770 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.58□□□□□ -0.08
Thumpd3P97770 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
Thumpd3P97770 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd3P97770 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.57□□□□□ -0.08
Thumpd3P97770 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.57□□□□□ -0.08
Thumpd3P97770 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Thumpd3P97770 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.57□□□□□ -0.08
Thumpd3P97770 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.57□□□□□ -0.08
Thumpd3P97770 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 Gm44492-201ENSMUST00000197012 141 ntBASIC14.57□□□□□ -0.08
Thumpd3P97770 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.57□□□□□ -0.08
Thumpd3P97770 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.57□□□□□ -0.08
Thumpd3P97770 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.57□□□□□ -0.08
Thumpd3P97770 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.57□□□□□ -0.08
Thumpd3P97770 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.57□□□□□ -0.08
Thumpd3P97770 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd3P97770 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Thumpd3P97770 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Thumpd3P97770 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Thumpd3P97770 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.56□□□□□ -0.08
Thumpd3P97770 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.56□□□□□ -0.08
Thumpd3P97770 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.56□□□□□ -0.08
Thumpd3P97770 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Thumpd3P97770 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Thumpd3P97770 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.56□□□□□ -0.08
Thumpd3P97770 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.56□□□□□ -0.08
Thumpd3P97770 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd3P97770 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Thumpd3P97770 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Thumpd3P97770 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms