Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.54□□□□□ -0.24
Nkx3-2P97503 Gm27533-201ENSMUST00000183800 152 ntBASIC13.54□□□□□ -0.24
Nkx3-2P97503 Mir8102-201ENSMUST00000184148 139 ntBASIC13.54□□□□□ -0.24
Nkx3-2P97503 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.54□□□□□ -0.24
Nkx3-2P97503 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.54□□□□□ -0.24
Nkx3-2P97503 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.54□□□□□ -0.24
Nkx3-2P97503 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx3-2P97503 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.53□□□□□ -0.24
Nkx3-2P97503 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.53□□□□□ -0.24
Nkx3-2P97503 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Gm9719-201ENSMUST00000162765 543 ntBASIC13.53□□□□□ -0.24
Nkx3-2P97503 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Olfr286-202ENSMUST00000205305 969 ntBASIC13.53□□□□□ -0.24
Nkx3-2P97503 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx3-2P97503 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.52□□□□□ -0.24
Nkx3-2P97503 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx3-2P97503 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx3-2P97503 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx3-2P97503 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.52□□□□□ -0.24
Nkx3-2P97503 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx3-2P97503 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx3-2P97503 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx3-2P97503 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx3-2P97503 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx3-2P97503 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Gm17837-201ENSMUST00000186435 985 ntBASIC13.52□□□□□ -0.25
Nkx3-2P97503 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Gm6888-201ENSMUST00000221983 706 ntBASIC13.52□□□□□ -0.25
Nkx3-2P97503 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.52□□□□□ -0.25
Nkx3-2P97503 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.52□□□□□ -0.25
Nkx3-2P97503 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms