Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.81■□□□□ 0.44
Smarcc1P97496 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Smarcc1P97496 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.81■□□□□ 0.44
Smarcc1P97496 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.81■□□□□ 0.44
Smarcc1P97496 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC17.81■□□□□ 0.44
Smarcc1P97496 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Smarcc1P97496 Gm37714-201ENSMUST00000194742 342 ntBASIC17.81■□□□□ 0.44
Smarcc1P97496 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.81■□□□□ 0.44
Smarcc1P97496 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.81■□□□□ 0.44
Smarcc1P97496 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.81■□□□□ 0.44
Smarcc1P97496 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.81■□□□□ 0.44
Smarcc1P97496 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Smarcc1P97496 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc1P97496 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc1P97496 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc1P97496 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc1P97496 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.8■□□□□ 0.44
Smarcc1P97496 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc1P97496 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc1P97496 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc1P97496 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc1P97496 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Smarcc1P97496 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.8■□□□□ 0.44
Smarcc1P97496 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Smarcc1P97496 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc1P97496 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc1P97496 Gm11524-201ENSMUST00000119349 807 ntBASIC17.8■□□□□ 0.44
Smarcc1P97496 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Smarcc1P97496 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.8■□□□□ 0.44
Smarcc1P97496 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc1P97496 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.8■□□□□ 0.44
Smarcc1P97496 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Smarcc1P97496 Olfr582-201ENSMUST00000098212 960 ntBASIC17.8■□□□□ 0.44
Smarcc1P97496 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.8■□□□□ 0.44
Smarcc1P97496 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc1P97496 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc1P97496 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Smarcc1P97496 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Smarcc1P97496 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Smarcc1P97496 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
Smarcc1P97496 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.79■□□□□ 0.44
Smarcc1P97496 Gm15198-201ENSMUST00000117283 177 ntBASIC17.79■□□□□ 0.44
Smarcc1P97496 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.79■□□□□ 0.44
Smarcc1P97496 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.79■□□□□ 0.44
Smarcc1P97496 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.79■□□□□ 0.44
Smarcc1P97496 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Gm8399-201ENSMUST00000082300 1117 ntBASIC17.79■□□□□ 0.44
Smarcc1P97496 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.79■□□□□ 0.44
Smarcc1P97496 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.79■□□□□ 0.44
Smarcc1P97496 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.79■□□□□ 0.44
Smarcc1P97496 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.79■□□□□ 0.44
Smarcc1P97496 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Smarcc1P97496 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc1P97496 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Smarcc1P97496 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.78■□□□□ 0.44
Smarcc1P97496 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.78■□□□□ 0.44
Smarcc1P97496 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Smarcc1P97496 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms