Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43cP86449 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Trim43cP86449 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43cP86449 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43cP86449 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim43cP86449 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43cP86449 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.56■□□□□ 0.08
Trim43cP86449 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43cP86449 Gm15957-201ENSMUST00000118893 974 ntBASIC15.56■□□□□ 0.08
Trim43cP86449 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim43cP86449 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.56■□□□□ 0.08
Trim43cP86449 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43cP86449 Gm26308-201ENSMUST00000157768 69 ntBASIC15.56■□□□□ 0.08
Trim43cP86449 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Trim43cP86449 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43cP86449 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim43cP86449 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.56■□□□□ 0.08
Trim43cP86449 Gm45453-201ENSMUST00000211758 853 ntBASIC15.56■□□□□ 0.08
Trim43cP86449 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.56■□□□□ 0.08
Trim43cP86449 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.56■□□□□ 0.08
Trim43cP86449 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim43cP86449 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43cP86449 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43cP86449 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.56■□□□□ 0.08
Trim43cP86449 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43cP86449 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43cP86449 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trim43cP86449 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43cP86449 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trim43cP86449 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43cP86449 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim43cP86449 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43cP86449 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43cP86449 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43cP86449 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43cP86449 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43cP86449 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43cP86449 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43cP86449 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43cP86449 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43cP86449 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trim43cP86449 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43cP86449 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43cP86449 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43cP86449 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Trim43cP86449 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43cP86449 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.55■□□□□ 0.08
Trim43cP86449 Gm6222-201ENSMUST00000120787 396 ntBASIC15.55■□□□□ 0.08
Trim43cP86449 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.55■□□□□ 0.08
Trim43cP86449 Gm9719-201ENSMUST00000162765 543 ntBASIC15.55■□□□□ 0.08
Trim43cP86449 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.55■□□□□ 0.08
Trim43cP86449 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim43cP86449 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43cP86449 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43cP86449 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43cP86449 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43cP86449 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43cP86449 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim43cP86449 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43cP86449 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim43cP86449 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43cP86449 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.54■□□□□ 0.08
Trim43cP86449 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43cP86449 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43cP86449 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim43cP86449 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim43cP86449 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43cP86449 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43cP86449 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43cP86449 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim43cP86449 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43cP86449 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim43cP86449 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43cP86449 Gm10253-201ENSMUST00000194270 940 ntBASIC15.54■□□□□ 0.08
Trim43cP86449 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim43cP86449 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43cP86449 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43cP86449 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43cP86449 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim43cP86449 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43cP86449 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43cP86449 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim43cP86449 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43cP86449 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim43cP86449 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
Trim43cP86449 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43cP86449 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43cP86449 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim43cP86449 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.53■□□□□ 0.08
Trim43cP86449 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43cP86449 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43cP86449 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43cP86449 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43cP86449 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43cP86449 Gm6415-201ENSMUST00000118488 348 ntBASIC15.53■□□□□ 0.08
Trim43cP86449 Gm24158-201ENSMUST00000175263 71 ntBASIC15.53■□□□□ 0.08
Trim43cP86449 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim43cP86449 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.53■□□□□ 0.08
Trim43cP86449 Gm16476-201ENSMUST00000221544 139 ntBASIC15.53■□□□□ 0.08
Trim43cP86449 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms