Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SgcaP82350 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.01□□□□□ -0.49
SgcaP82350 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcaP82350 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.01□□□□□ -0.49
SgcaP82350 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
SgcaP82350 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SgcaP82350 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SgcaP82350 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Gm8097-201ENSMUST00000117903 829 ntBASIC12□□□□□ -0.49
SgcaP82350 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SgcaP82350 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Gm6659-201ENSMUST00000174752 547 ntBASIC12□□□□□ -0.49
SgcaP82350 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 AC164567.1-201ENSMUST00000219185 960 ntBASIC12□□□□□ -0.49
SgcaP82350 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12□□□□□ -0.49
SgcaP82350 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SgcaP82350 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SgcaP82350 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SgcaP82350 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcaP82350 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
SgcaP82350 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
SgcaP82350 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
SgcaP82350 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.99□□□□□ -0.49
SgcaP82350 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
SgcaP82350 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.99□□□□□ -0.49
SgcaP82350 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SgcaP82350 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.99□□□□□ -0.49
SgcaP82350 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.99□□□□□ -0.49
SgcaP82350 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
SgcaP82350 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.99□□□□□ -0.49
SgcaP82350 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SgcaP82350 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SgcaP82350 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcaP82350 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms