Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm21825-201ENSMUST00000185728 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm29109-201ENSMUST00000185895 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm17837-201ENSMUST00000186435 985 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm21896-201ENSMUST00000186520 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm21873-201ENSMUST00000186728 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm21794-201ENSMUST00000187056 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm21880-201ENSMUST00000187275 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm21826-201ENSMUST00000187451 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm21198-201ENSMUST00000188393 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm21749-201ENSMUST00000189343 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm21901-201ENSMUST00000189568 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm29424-201ENSMUST00000189716 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm28599-201ENSMUST00000189838 694 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm21867-201ENSMUST00000189917 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm29269-201ENSMUST00000190087 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm21722-201ENSMUST00000190153 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm28423-201ENSMUST00000190701 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm21899-201ENSMUST00000190745 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm21910-201ENSMUST00000191163 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm21849-201ENSMUST00000191571 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm28678-201ENSMUST00000191593 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm20910-201ENSMUST00000193268 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Gm21871-201ENSMUST00000194621 696 ntBASIC12.77□□□□□ -0.37
SgcbP82349 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.77□□□□□ -0.37
SgcbP82349 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcbP82349 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcbP82349 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcbP82349 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcbP82349 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SgcbP82349 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcbP82349 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcbP82349 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SgcbP82349 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Carlr-201ENSMUST00000181515 2574 ntBASIC12.76□□□□□ -0.37
SgcbP82349 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.76□□□□□ -0.37
SgcbP82349 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
SgcbP82349 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
SgcbP82349 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.76□□□□□ -0.37
SgcbP82349 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.76□□□□□ -0.37
SgcbP82349 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Gm27622-201ENSMUST00000183779 60 ntBASIC12.76□□□□□ -0.37
SgcbP82349 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.76□□□□□ -0.37
SgcbP82349 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SgcbP82349 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.76□□□□□ -0.37
SgcbP82349 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SgcbP82349 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SgcbP82349 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcbP82349 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcbP82349 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcbP82349 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcbP82349 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SgcbP82349 Gm5566-201ENSMUST00000116118 459 ntBASIC12.75□□□□□ -0.37
SgcbP82349 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.75□□□□□ -0.37
SgcbP82349 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SgcbP82349 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.75□□□□□ -0.37
SgcbP82349 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcbP82349 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SgcbP82349 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SgcbP82349 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcbP82349 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.75□□□□□ -0.37
SgcbP82349 Gm29541-201ENSMUST00000191351 678 ntBASIC12.75□□□□□ -0.37
SgcbP82349 Gm10576-201ENSMUST00000191927 825 ntBASIC12.75□□□□□ -0.37
SgcbP82349 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC12.75□□□□□ -0.37
SgcbP82349 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.75□□□□□ -0.37
SgcbP82349 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SgcbP82349 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcbP82349 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcbP82349 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcbP82349 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcbP82349 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms