Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb1P63158 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.74■□□□□ 0.11
Hmgb1P63158 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb1P63158 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb1P63158 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb1P63158 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb1P63158 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb1P63158 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
Hmgb1P63158 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb1P63158 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb1P63158 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb1P63158 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb1P63158 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Hmgb1P63158 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.73■□□□□ 0.11
Hmgb1P63158 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.73■□□□□ 0.11
Hmgb1P63158 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.73■□□□□ 0.11
Hmgb1P63158 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.73■□□□□ 0.11
Hmgb1P63158 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Hmgb1P63158 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb1P63158 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.73■□□□□ 0.11
Hmgb1P63158 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hmgb1P63158 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.72■□□□□ 0.11
Hmgb1P63158 Gm6973-201ENSMUST00000117080 721 ntBASIC15.72■□□□□ 0.11
Hmgb1P63158 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.72■□□□□ 0.11
Hmgb1P63158 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.72■□□□□ 0.11
Hmgb1P63158 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.72■□□□□ 0.11
Hmgb1P63158 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.72■□□□□ 0.11
Hmgb1P63158 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb1P63158 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Hmgb1P63158 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Hmgb1P63158 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.71■□□□□ 0.11
Hmgb1P63158 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb1P63158 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
Hmgb1P63158 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.71■□□□□ 0.11
Hmgb1P63158 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.71■□□□□ 0.11
Hmgb1P63158 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb1P63158 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb1P63158 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Hmgb1P63158 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
Hmgb1P63158 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb1P63158 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.71■□□□□ 0.11
Hmgb1P63158 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb1P63158 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb1P63158 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb1P63158 Gm18737-201ENSMUST00000173594 937 ntBASIC15.71■□□□□ 0.11
Hmgb1P63158 Mir3113-201ENSMUST00000175478 76 ntBASIC15.71■□□□□ 0.11
Hmgb1P63158 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.71■□□□□ 0.11
Hmgb1P63158 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.71■□□□□ 0.11
Hmgb1P63158 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.71■□□□□ 0.11
Hmgb1P63158 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.71■□□□□ 0.11
Hmgb1P63158 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb1P63158 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb1P63158 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb1P63158 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb1P63158 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb1P63158 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb1P63158 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms