Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.04□□□□□ -0.32
Lsm3P62311 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Gm13312-201ENSMUST00000119631 718 ntBASIC13.04□□□□□ -0.32
Lsm3P62311 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.04□□□□□ -0.32
Lsm3P62311 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lsm3P62311 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lsm3P62311 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Lsm3P62311 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lsm3P62311 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lsm3P62311 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.04□□□□□ -0.32
Lsm3P62311 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lsm3P62311 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.04□□□□□ -0.32
Lsm3P62311 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lsm3P62311 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.03□□□□□ -0.32
Lsm3P62311 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lsm3P62311 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm3P62311 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Lsm3P62311 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lsm3P62311 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.03□□□□□ -0.32
Lsm3P62311 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.03□□□□□ -0.32
Lsm3P62311 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.03□□□□□ -0.32
Lsm3P62311 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Lsm3P62311 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lsm3P62311 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm3P62311 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm3P62311 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm3P62311 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm3P62311 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm3P62311 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm3P62311 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm3P62311 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm3P62311 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm3P62311 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm3P62311 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm3P62311 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm3P62311 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.02□□□□□ -0.33
Lsm3P62311 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lsm3P62311 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Lsm3P62311 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Lsm3P62311 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Lsm3P62311 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms