Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Sec61a1P61620 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.64□□□□□ -0.39
Sec61a1P61620 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61a1P61620 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sec61a1P61620 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sec61a1P61620 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.63□□□□□ -0.39
Sec61a1P61620 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sec61a1P61620 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.63□□□□□ -0.39
Sec61a1P61620 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.63□□□□□ -0.39
Sec61a1P61620 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Sec61a1P61620 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.63□□□□□ -0.39
Sec61a1P61620 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Gm25911-201ENSMUST00000157621 56 ntBASIC12.63□□□□□ -0.39
Sec61a1P61620 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Gm8318-201ENSMUST00000182954 872 ntBASIC12.63□□□□□ -0.39
Sec61a1P61620 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61a1P61620 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sec61a1P61620 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sec61a1P61620 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.62□□□□□ -0.39
Sec61a1P61620 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.62□□□□□ -0.39
Sec61a1P61620 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.62□□□□□ -0.39
Sec61a1P61620 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Sec61a1P61620 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sec61a1P61620 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sec61a1P61620 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.62□□□□□ -0.39
Sec61a1P61620 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.62□□□□□ -0.39
Sec61a1P61620 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.62□□□□□ -0.39
Sec61a1P61620 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61a1P61620 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sec61a1P61620 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sec61a1P61620 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sec61a1P61620 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.61□□□□□ -0.39
Sec61a1P61620 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.61□□□□□ -0.39
Sec61a1P61620 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.61□□□□□ -0.39
Sec61a1P61620 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.61□□□□□ -0.39
Sec61a1P61620 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Sec61a1P61620 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms