Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps33bP59016 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vps33bP59016 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Vps33bP59016 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.83■□□□□ 0.44
Vps33bP59016 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.83■□□□□ 0.44
Vps33bP59016 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vps33bP59016 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps33bP59016 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33bP59016 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33bP59016 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33bP59016 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33bP59016 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33bP59016 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC17.82■□□□□ 0.44
Vps33bP59016 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33bP59016 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33bP59016 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.82■□□□□ 0.44
Vps33bP59016 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33bP59016 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Vps33bP59016 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33bP59016 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33bP59016 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Vps33bP59016 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33bP59016 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33bP59016 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Vps33bP59016 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps33bP59016 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33bP59016 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.81■□□□□ 0.44
Vps33bP59016 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33bP59016 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC17.81■□□□□ 0.44
Vps33bP59016 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33bP59016 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33bP59016 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33bP59016 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33bP59016 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.81■□□□□ 0.44
Vps33bP59016 Gm13786-201ENSMUST00000122371 333 ntBASIC17.81■□□□□ 0.44
Vps33bP59016 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33bP59016 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC17.81■□□□□ 0.44
Vps33bP59016 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Vps33bP59016 AC154462.2-201ENSMUST00000227519 370 ntBASIC17.81■□□□□ 0.44
Vps33bP59016 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33bP59016 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Vps33bP59016 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33bP59016 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33bP59016 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Vps33bP59016 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps33bP59016 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC17.8■□□□□ 0.44
Vps33bP59016 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Vps33bP59016 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.8■□□□□ 0.44
Vps33bP59016 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Vps33bP59016 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 Gm25261-201ENSMUST00000157416 134 ntBASIC17.8■□□□□ 0.44
Vps33bP59016 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Vps33bP59016 Gm29396-201ENSMUST00000185659 716 ntBASIC17.8■□□□□ 0.44
Vps33bP59016 Gm38000-201ENSMUST00000192390 1215 ntBASIC17.8■□□□□ 0.44
Vps33bP59016 Gm29741-201ENSMUST00000192667 421 ntBASIC17.8■□□□□ 0.44
Vps33bP59016 Gm43068-201ENSMUST00000201095 1273 ntBASIC17.8■□□□□ 0.44
Vps33bP59016 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.8■□□□□ 0.44
Vps33bP59016 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Vps33bP59016 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.8■□□□□ 0.44
Vps33bP59016 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Vps33bP59016 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps33bP59016 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Vps33bP59016 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.8■□□□□ 0.44
Vps33bP59016 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33bP59016 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33bP59016 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33bP59016 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33bP59016 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC17.79■□□□□ 0.44
Vps33bP59016 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33bP59016 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33bP59016 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33bP59016 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33bP59016 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33bP59016 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC17.79■□□□□ 0.44
Vps33bP59016 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps33bP59016 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC17.79■□□□□ 0.44
Vps33bP59016 Gm25927-201ENSMUST00000175058 117 ntBASIC17.79■□□□□ 0.44
Vps33bP59016 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.79■□□□□ 0.44
Vps33bP59016 Gm38144-201ENSMUST00000192790 465 ntBASIC17.79■□□□□ 0.44
Vps33bP59016 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC17.79■□□□□ 0.44
Vps33bP59016 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC17.79■□□□□ 0.44
Vps33bP59016 Gm9176-201ENSMUST00000219955 1120 ntBASIC17.79■□□□□ 0.44
Vps33bP59016 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.79■□□□□ 0.44
Vps33bP59016 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms