Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sssca1P56873 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.58□□□□□ -0.55
Sssca1P56873 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sssca1P56873 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sssca1P56873 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sssca1P56873 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.58□□□□□ -0.56
Sssca1P56873 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Sssca1P56873 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Birc2-201ENSMUST00000054878 378 ntBASIC11.58□□□□□ -0.56
Sssca1P56873 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.58□□□□□ -0.56
Sssca1P56873 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Sssca1P56873 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sssca1P56873 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sssca1P56873 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sssca1P56873 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sssca1P56873 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sssca1P56873 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.57□□□□□ -0.56
Sssca1P56873 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.57□□□□□ -0.56
Sssca1P56873 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Sssca1P56873 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.57□□□□□ -0.56
Sssca1P56873 Gm27459-201ENSMUST00000184860 107 ntBASIC11.57□□□□□ -0.56
Sssca1P56873 Ank2-226ENSMUST00000189368 339 ntBASIC11.57□□□□□ -0.56
Sssca1P56873 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.57□□□□□ -0.56
Sssca1P56873 Gm2451-201ENSMUST00000199447 999 ntBASIC11.57□□□□□ -0.56
Sssca1P56873 Gm10290-201ENSMUST00000200451 999 ntBASIC11.57□□□□□ -0.56
Sssca1P56873 Olfr286-202ENSMUST00000205305 969 ntBASIC11.57□□□□□ -0.56
Sssca1P56873 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.57□□□□□ -0.56
Sssca1P56873 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sssca1P56873 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Sssca1P56873 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sssca1P56873 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.57□□□□□ -0.56
Sssca1P56873 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.57□□□□□ -0.56
Sssca1P56873 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sssca1P56873 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sssca1P56873 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sssca1P56873 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.56□□□□□ -0.56
Sssca1P56873 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms