Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm18049-201ENSMUST00000208909 581 ntBASIC15.41■□□□□ 0.06
Nub1P54729 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Nub1P54729 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nub1P54729 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.41■□□□□ 0.06
Nub1P54729 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nub1P54729 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Nub1P54729 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Nub1P54729 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nub1P54729 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nub1P54729 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nub1P54729 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nub1P54729 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Nub1P54729 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nub1P54729 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nub1P54729 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nub1P54729 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nub1P54729 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.4■□□□□ 0.06
Nub1P54729 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Nub1P54729 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.4■□□□□ 0.06
Nub1P54729 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Nub1P54729 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nub1P54729 Mir449b-201ENSMUST00000104833 80 ntBASIC15.4■□□□□ 0.06
Nub1P54729 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Nub1P54729 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.4■□□□□ 0.06
Nub1P54729 Gm10275-202ENSMUST00000168697 495 ntBASIC15.4■□□□□ 0.06
Nub1P54729 Gm24158-201ENSMUST00000175263 71 ntBASIC15.4■□□□□ 0.06
Nub1P54729 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Gm5779-201ENSMUST00000218467 910 ntBASIC15.4■□□□□ 0.06
Nub1P54729 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Gm10275-201ENSMUST00000092620 635 ntBASIC15.4■□□□□ 0.06
Nub1P54729 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nub1P54729 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Nub1P54729 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nub1P54729 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Nub1P54729 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.39■□□□□ 0.05
Nub1P54729 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nub1P54729 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Nub1P54729 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.39■□□□□ 0.05
Nub1P54729 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nub1P54729 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nub1P54729 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nub1P54729 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nub1P54729 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nub1P54729 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nub1P54729 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nub1P54729 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nub1P54729 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nub1P54729 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nub1P54729 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nub1P54729 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.39■□□□□ 0.05
Nub1P54729 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Nub1P54729 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Nub1P54729 Gm29310-201ENSMUST00000185468 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm21825-201ENSMUST00000185728 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm29109-201ENSMUST00000185895 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm21896-201ENSMUST00000186520 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm21873-201ENSMUST00000186728 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm21794-201ENSMUST00000187056 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm21880-201ENSMUST00000187275 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm21826-201ENSMUST00000187451 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm21198-201ENSMUST00000188393 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm21749-201ENSMUST00000189343 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm21901-201ENSMUST00000189568 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm29424-201ENSMUST00000189716 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm18766-201ENSMUST00000189811 808 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm28599-201ENSMUST00000189838 694 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm21867-201ENSMUST00000189917 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm29269-201ENSMUST00000190087 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm21722-201ENSMUST00000190153 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm28423-201ENSMUST00000190701 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm21899-201ENSMUST00000190745 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm21910-201ENSMUST00000191163 696 ntBASIC15.39■□□□□ 0.05
Nub1P54729 Gm21849-201ENSMUST00000191571 696 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms