Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Msh6P54276 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
Msh6P54276 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC18■□□□□ 0.47
Msh6P54276 Gm27839-201ENSMUST00000184242 106 ntBASIC18■□□□□ 0.47
Msh6P54276 Gm8463-201ENSMUST00000208573 613 ntBASIC18■□□□□ 0.47
Msh6P54276 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC18■□□□□ 0.47
Msh6P54276 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Rassf8-202ENSMUST00000058538 1131 ntBASIC18■□□□□ 0.47
Msh6P54276 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC18■□□□□ 0.47
Msh6P54276 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh6P54276 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh6P54276 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.99■□□□□ 0.47
Msh6P54276 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh6P54276 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Msh6P54276 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh6P54276 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh6P54276 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh6P54276 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.99■□□□□ 0.47
Msh6P54276 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh6P54276 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh6P54276 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Msh6P54276 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Msh6P54276 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.99■□□□□ 0.47
Msh6P54276 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Msh6P54276 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.99■□□□□ 0.47
Msh6P54276 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.99■□□□□ 0.47
Msh6P54276 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.99■□□□□ 0.47
Msh6P54276 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC17.99■□□□□ 0.47
Msh6P54276 Gm17794-201ENSMUST00000220252 955 ntBASIC17.99■□□□□ 0.47
Msh6P54276 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.99■□□□□ 0.47
Msh6P54276 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh6P54276 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh6P54276 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC17.99■□□□□ 0.47
Msh6P54276 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh6P54276 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh6P54276 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Msh6P54276 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh6P54276 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh6P54276 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh6P54276 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh6P54276 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh6P54276 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Msh6P54276 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Msh6P54276 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh6P54276 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh6P54276 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh6P54276 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh6P54276 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh6P54276 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Msh6P54276 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
Msh6P54276 Gm4804-201ENSMUST00000182234 999 ntBASIC17.98■□□□□ 0.47
Msh6P54276 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.98■□□□□ 0.47
Msh6P54276 Gm5425-201ENSMUST00000214125 459 ntBASIC17.98■□□□□ 0.47
Msh6P54276 Gm17795-201ENSMUST00000214505 757 ntBASIC17.98■□□□□ 0.47
Msh6P54276 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh6P54276 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh6P54276 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh6P54276 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh6P54276 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh6P54276 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Msh6P54276 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh6P54276 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Msh6P54276 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh6P54276 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh6P54276 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Msh6P54276 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.97■□□□□ 0.47
Msh6P54276 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.97■□□□□ 0.47
Msh6P54276 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh6P54276 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh6P54276 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.97■□□□□ 0.47
Msh6P54276 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Msh6P54276 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh6P54276 Gm15240-201ENSMUST00000118156 720 ntBASIC17.97■□□□□ 0.47
Msh6P54276 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Msh6P54276 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.97■□□□□ 0.47
Msh6P54276 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Msh6P54276 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh6P54276 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh6P54276 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Msh6P54276 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.97■□□□□ 0.47
Msh6P54276 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.97■□□□□ 0.47
Msh6P54276 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Msh6P54276 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Msh6P54276 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh6P54276 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh6P54276 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh6P54276 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh6P54276 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Msh6P54276 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.97■□□□□ 0.47
Msh6P54276 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Msh6P54276 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.96■□□□□ 0.47
Msh6P54276 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh6P54276 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms