Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdx1P52946 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pdx1P52946 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.16□□□□□ -0.14
Pdx1P52946 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.16□□□□□ -0.14
Pdx1P52946 Gm6222-201ENSMUST00000120787 396 ntBASIC14.16□□□□□ -0.14
Pdx1P52946 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pdx1P52946 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.16□□□□□ -0.14
Pdx1P52946 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.16□□□□□ -0.14
Pdx1P52946 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.16□□□□□ -0.14
Pdx1P52946 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Pdx1P52946 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdx1P52946 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.16□□□□□ -0.14
Pdx1P52946 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.15□□□□□ -0.14
Pdx1P52946 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Pdx1P52946 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.15□□□□□ -0.14
Pdx1P52946 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Pdx1P52946 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Pdx1P52946 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.15□□□□□ -0.14
Pdx1P52946 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.15□□□□□ -0.14
Pdx1P52946 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.15□□□□□ -0.14
Pdx1P52946 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.15□□□□□ -0.14
Pdx1P52946 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.15□□□□□ -0.14
Pdx1P52946 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Pdx1P52946 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.15□□□□□ -0.14
Pdx1P52946 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.15□□□□□ -0.14
Pdx1P52946 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdx1P52946 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.15□□□□□ -0.14
Pdx1P52946 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.15□□□□□ -0.15
Pdx1P52946 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Pdx1P52946 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Pdx1P52946 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Pdx1P52946 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.14□□□□□ -0.15
Pdx1P52946 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdx1P52946 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdx1P52946 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pdx1P52946 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdx1P52946 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pdx1P52946 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pdx1P52946 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdx1P52946 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pdx1P52946 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdx1P52946 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.14□□□□□ -0.15
Pdx1P52946 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pdx1P52946 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.14□□□□□ -0.15
Pdx1P52946 Gm15693-201ENSMUST00000120470 637 ntBASIC14.14□□□□□ -0.15
Pdx1P52946 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.14□□□□□ -0.15
Pdx1P52946 Gm9719-201ENSMUST00000162765 543 ntBASIC14.14□□□□□ -0.15
Pdx1P52946 Gm27631-201ENSMUST00000184163 466 ntBASIC14.14□□□□□ -0.15
Pdx1P52946 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.14□□□□□ -0.15
Pdx1P52946 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdx1P52946 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pdx1P52946 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pdx1P52946 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.14□□□□□ -0.15
Pdx1P52946 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdx1P52946 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdx1P52946 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.14□□□□□ -0.15
Pdx1P52946 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pdx1P52946 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdx1P52946 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms