Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-1P50220 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.86□□□□□ -0.51
Nkx2-1P50220 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Birc2-201ENSMUST00000054878 378 ntBASIC11.86□□□□□ -0.51
Nkx2-1P50220 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.86□□□□□ -0.51
Nkx2-1P50220 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-1P50220 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.86□□□□□ -0.51
Nkx2-1P50220 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.86□□□□□ -0.51
Nkx2-1P50220 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-1P50220 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.85□□□□□ -0.51
Nkx2-1P50220 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.85□□□□□ -0.51
Nkx2-1P50220 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkx2-1P50220 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Gm14042-201ENSMUST00000120139 833 ntBASIC11.85□□□□□ -0.51
Nkx2-1P50220 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Gm4535-201ENSMUST00000182274 558 ntBASIC11.85□□□□□ -0.51
Nkx2-1P50220 Gm43347-201ENSMUST00000200226 580 ntBASIC11.85□□□□□ -0.51
Nkx2-1P50220 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Gm10355-201ENSMUST00000097146 517 ntBASIC11.85□□□□□ -0.51
Nkx2-1P50220 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-1P50220 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Nkx2-1P50220 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Gm8749-201ENSMUST00000117737 331 ntBASIC11.84□□□□□ -0.51
Nkx2-1P50220 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.84□□□□□ -0.51
Nkx2-1P50220 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.84□□□□□ -0.51
Nkx2-1P50220 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx2-1P50220 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.84□□□□□ -0.51
Nkx2-1P50220 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms