Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atoh1P48985 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atoh1P48985 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Atoh1P48985 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atoh1P48985 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.05■□□□□ 0.16
Atoh1P48985 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.05■□□□□ 0.16
Atoh1P48985 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.05■□□□□ 0.16
Atoh1P48985 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.05■□□□□ 0.16
Atoh1P48985 Gm22331-201ENSMUST00000158066 136 ntBASIC16.05■□□□□ 0.16
Atoh1P48985 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Gm27772-201ENSMUST00000184900 187 ntBASIC16.05■□□□□ 0.16
Atoh1P48985 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Atoh1P48985 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Atoh1P48985 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Atoh1P48985 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Atoh1P48985 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atoh1P48985 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Atoh1P48985 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.04■□□□□ 0.16
Atoh1P48985 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.04■□□□□ 0.16
Atoh1P48985 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Atoh1P48985 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Atoh1P48985 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Atoh1P48985 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Atoh1P48985 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.04■□□□□ 0.16
Atoh1P48985 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Atoh1P48985 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Atoh1P48985 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC16.04■□□□□ 0.16
Atoh1P48985 Gm16177-201ENSMUST00000120728 718 ntBASIC16.04■□□□□ 0.16
Atoh1P48985 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.04■□□□□ 0.16
Atoh1P48985 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.04■□□□□ 0.16
Atoh1P48985 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.04■□□□□ 0.16
Atoh1P48985 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Gm44397-201ENSMUST00000195950 113 ntBASIC16.04■□□□□ 0.16
Atoh1P48985 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.04■□□□□ 0.16
Atoh1P48985 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.04■□□□□ 0.16
Atoh1P48985 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Atoh1P48985 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Atoh1P48985 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atoh1P48985 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atoh1P48985 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atoh1P48985 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atoh1P48985 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atoh1P48985 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atoh1P48985 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Atoh1P48985 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atoh1P48985 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atoh1P48985 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atoh1P48985 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.03■□□□□ 0.16
Atoh1P48985 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atoh1P48985 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atoh1P48985 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atoh1P48985 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atoh1P48985 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atoh1P48985 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Atoh1P48985 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atoh1P48985 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Atoh1P48985 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Atoh1P48985 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms