Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Brca1P48754 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.77■□□□□ 0.11
Brca1P48754 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.77■□□□□ 0.11
Brca1P48754 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Brca1P48754 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Brca1P48754 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Brca1P48754 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Brca1P48754 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Brca1P48754 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Brca1P48754 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Brca1P48754 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Brca1P48754 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Brca1P48754 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Brca1P48754 Gm29396-201ENSMUST00000185659 716 ntBASIC15.76■□□□□ 0.11
Brca1P48754 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.76■□□□□ 0.11
Brca1P48754 Gm18753-201ENSMUST00000201000 566 ntBASIC15.76■□□□□ 0.11
Brca1P48754 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Brca1P48754 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Brca1P48754 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Brca1P48754 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Brca1P48754 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.76■□□□□ 0.11
Brca1P48754 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Brca1P48754 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.76■□□□□ 0.11
Brca1P48754 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Brca1P48754 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.76■□□□□ 0.11
Brca1P48754 Gm22323-201ENSMUST00000103832 109 ntBASIC15.75■□□□□ 0.11
Brca1P48754 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.75■□□□□ 0.11
Brca1P48754 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Brca1P48754 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.75■□□□□ 0.11
Brca1P48754 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.75■□□□□ 0.11
Brca1P48754 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Brca1P48754 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Brca1P48754 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Brca1P48754 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Brca1P48754 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Brca1P48754 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Brca1P48754 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Brca1P48754 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Brca1P48754 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Brca1P48754 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Brca1P48754 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Brca1P48754 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
Brca1P48754 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Brca1P48754 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.75■□□□□ 0.11
Brca1P48754 Efs-202ENSMUST00000227037 2540 ntBASIC15.75■□□□□ 0.11
Brca1P48754 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Brca1P48754 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.75■□□□□ 0.11
Brca1P48754 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Brca1P48754 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Brca1P48754 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Brca1P48754 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Brca1P48754 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Brca1P48754 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Brca1P48754 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.74■□□□□ 0.11
Brca1P48754 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brca1P48754 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.74■□□□□ 0.11
Brca1P48754 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Brca1P48754 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brca1P48754 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brca1P48754 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Brca1P48754 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brca1P48754 Mir877-201ENSMUST00000104738 85 ntBASIC15.74■□□□□ 0.11
Brca1P48754 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.74■□□□□ 0.11
Brca1P48754 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.74■□□□□ 0.11
Brca1P48754 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.74■□□□□ 0.11
Brca1P48754 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.74■□□□□ 0.11
Brca1P48754 Gm12403-201ENSMUST00000121384 959 ntBASIC15.74■□□□□ 0.11
Brca1P48754 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.74■□□□□ 0.11
Brca1P48754 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Brca1P48754 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Brca1P48754 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.74■□□□□ 0.11
Brca1P48754 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.74■□□□□ 0.11
Brca1P48754 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.74■□□□□ 0.11
Brca1P48754 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.74■□□□□ 0.11
Brca1P48754 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.74■□□□□ 0.11
Brca1P48754 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brca1P48754 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Brca1P48754 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Brca1P48754 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Brca1P48754 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.74■□□□□ 0.11
Brca1P48754 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brca1P48754 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brca1P48754 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Brca1P48754 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Brca1P48754 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brca1P48754 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Brca1P48754 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Brca1P48754 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Gm1335-201ENSMUST00000121653 386 ntBASIC15.73■□□□□ 0.11
Brca1P48754 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Brca1P48754 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.73■□□□□ 0.11
Brca1P48754 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Gm45865-201ENSMUST00000211815 945 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms