Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.53□□□□□ -0.24
Nkx2-6P43688 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.53□□□□□ -0.24
Nkx2-6P43688 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx2-6P43688 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.53□□□□□ -0.24
Nkx2-6P43688 Gm9794-201ENSMUST00000202370 423 ntBASIC13.53□□□□□ -0.24
Nkx2-6P43688 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx2-6P43688 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.53□□□□□ -0.24
Nkx2-6P43688 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.53□□□□□ -0.24
Nkx2-6P43688 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-6P43688 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-6P43688 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-6P43688 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-6P43688 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-6P43688 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-6P43688 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-6P43688 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-6P43688 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Gm21854-201ENSMUST00000179901 471 ntBASIC13.52□□□□□ -0.25
Nkx2-6P43688 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.52□□□□□ -0.25
Nkx2-6P43688 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Mir125a-201ENSMUST00000083545 68 ntBASIC13.52□□□□□ -0.25
Nkx2-6P43688 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-6P43688 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Nkx2-6P43688 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Gm6218-201ENSMUST00000219812 628 ntBASIC13.51□□□□□ -0.25
Nkx2-6P43688 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.51□□□□□ -0.25
Nkx2-6P43688 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-6P43688 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms